BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B05SP1|AL428166
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1915 0.0
>3x_Contig1762
Length = 22098
Score = 1915 bits (964), Expect = 0.0
Identities = 981/986 (99%), Gaps = 2/986 (0%)
Strand = Plus / Minus
Query: 1 tcwcctcaaacacaacaaaggatcagtgcttttttttgatagaattgaagtcttttgcga 60
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17580 tctcctcaaacacaacaaaggatcagtgcttttttttgatagaattgaagtcttttgcga 17521
Query: 61 ggtcaaaaagctgtatcttaggttctttgtataccccagttacatctttctgtttctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17520 ggtcaaaaagctgtatcttaggttctttgtataccccagttacatctttctgtttctctc 17461
Query: 121 tagtggtttgcctgtgattttttagatcgatagggttgtgtccgaaatatctttcgtgat 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17460 tagtggtt-gcctgtgattttttagatcgatagggttgtgtccgaaatatctttcgtgat 17402
Query: 181 gaatataaacgagaaaccggtcacgtcgttcgaccttgaacccaatccgtttgaacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17401 gaatataaacgagaaaccggtcacgtcgttcgaccttgaacccaatccgtttgaacagag 17342
Query: 241 ctttgcgtctaccaagaagggtcctgttgccagtaacggtgagattccggtaaaaaatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17341 ctttgcgtctaccaagaagggtcctgttgccagtaacggtgagattccggtaaaaaatgc 17282
Query: 301 gagtatwggaagtaactccggaaatgcgatcgtgactaccggtgccagtaccggtgtcaa 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17281 gagtattggaagtaactccggaaatgcgatcgtgactaccggtgccagtaccggtgtcaa 17222
Query: 361 tcctccgcatagtaatgctcctgtcttggataacaaagccaggctgttaatgaatattag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17221 tcctccgcatagtaatgctcctgtcttggataacaaagccaggctgttaatgaatattag 17162
Query: 421 tgcaggtgtaggtgcgactgcagcgggtgcagtagctggaaccgttgctgggggtgccga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17161 tgcaggtgtaggtgcgactgcagcgggtgcagtagctggaaccgttgctgggggtgccga 17102
Query: 481 ggccgttaaatctccgccacggtatctgaccacaaataaacctccaacgattcagtctcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17101 ggccgttaaatctccgccacggtatctgaccacaaataaacctccaacgattcagtctcc 17042
Query: 541 tcctatcttgagccctggaggttcaagaaggctgccccccttgaatatatctccaaatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17041 tcctatcttgagccctggaggttcaagaaggctgccccccttgaatatatctccaaatgc 16982
Query: 601 agcgatatccaattcgttacacggacaaacttcacctggtgctttttatctgaatttacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16981 agcgatatccaattcgttacacggacaaacttcacctggtgctttttatctgaatttacc 16922
Query: 661 aaagacagggctgactcctaacgaatccaatattagatctggactcactccagcagttat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16921 aaagacagggctgactcctaacgaatccaatattagatctggactcactccagcagttat 16862
Query: 721 gagtaacggtaacaataaccctagcaacaaccctactgtcccaactaatgaaattgtgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16861 gagtaacggtaacaataaccctagcaacaaccctactgtcccaactaatgaaattgtgcc 16802
Query: 781 cggccagaacaacctgtctgcaatacctgtggcgctaacgtcgtcatcgggattgacccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16801 cggccagaacaacctgtctgcaatacctgtggcgctaacgtcgtcatcgggattgacccc 16742
Query: 841 tggtaggttcactccgatgttgaactcactgttgaatatgccgtcagaagaaccggtatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16741 tggtaggttcactccgatgttgaactcactgttgaatatgccgtcagaagaaccggtatt 16682
Query: 901 -cccatggtgaacggctcaaattctataaacaatgctaacattaacagcagcaatgtgaa 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16681 ccccatggtgaacggctcaaattctataaacaatgctaacattaacagcagcaatgtgaa 16622
Query: 960 cactattgactccaacaatcmagcga 985
|||||||||||||||||||| |||||
Sbjct: 16621 cactattgactccaacaatcaagcga 16596
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5372
Number of Sequences: 1807
Number of extensions: 5372
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)